From FASTQ to figures
in minutes

Your AI bioinformatician on demand. Upload your data, describe your analysis, and get publication-ready results.

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Trusted by researchers at

Duke University University of Arkansas University of Wisconsin - Madison University of California - Riverside National University of Singapore Cleveland Clinic UC Berkeley Indian Institute of Technology University College London University of Southern California University of Oregon Sorbonne Université University of Pennsylvania Royal College of Surgeons in Ireland GKVK, Bengaluru Duke University University of Arkansas University of Wisconsin - Madison University of California - Riverside National University of Singapore Cleveland Clinic UC Berkeley Indian Institute of Technology University College London University of Southern California University of Oregon Sorbonne Université University of Pennsylvania Royal College of Surgeons in Ireland GKVK, Bengaluru

Three steps. Zero setup.

01

Upload

.fastq.gz .bam .h5 .csv — drag, drop, done.

02

Ask

Say "Run differential expression on treated vs control." Pipette picks the tools, sets parameters, runs the pipeline.

03

Discover

volcano_plot.png de_results.csv analysis_summary.txt — plus a literature-grounded report.

Grounded in published science

Every recommendation is backed by peer-reviewed literature — not model intuition.

20,000+
PubMed Central papers
78
curated skills
9
bioinformatics domains
Explore SkillGraph → Read the preprint →

Trusted by genomics and computational biology researchers

"I've been testing the Pipette.bio agent over the past few days, running both RNA-seq and PTCH2 analyses to evaluate reproducibility and interpretability. My experience was really good."

Ana Carolina Pacifico Bioinformatician, Statistical Programmer | Brazil

"I used Pipette for single cell analysis of my fish samples. Uploading the data and getting started was easy. The pipeline did most of what I expected. I would recommend Pipette to other users."

Nidal Karagic Group Leader | University of Helsinki, Finland

"Pipette is a great tool for lab biologists. It takes minutes to perform data analysis tasks that otherwise took days to complete."

Ananya Sharma Industry Professional | USA

"Tried Pipette.bio for my prokaryotic pipeline and it was genuinely solid. The AI actually understands bioinformatics workflows."

Parthiv Rajesh Bioinformatics Student | VIT, India

"I must say this a great platform, like one I always had in mind to develop."

Rajarshi Mondal Bioinformatician | India

Frequently asked

Bench scientists who generate sequencing data but depend on others to analyze it, small labs without a dedicated bioinformatician, and PIs who need auditable, reproducible pipelines across their team.

Every analysis records its full lineage — inputs, parameters, software versions, outputs, and code — so results can be reproduced on any machine, any time.

No. Pipette runs entirely in your browser. Log in, upload your data, and start analyzing.

Popular open-source tools across RNA-seq, single-cell, ChIP/ATAC-seq, variant calling, metagenomics, and more — including STAR, Salmon, DESeq2, Seurat, GATK, MACS2, and bcftools. See real analyses →

Ready to accelerate your research?

Run your first analysis free. No installation required.

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